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Online Databases & Tools

Tools

CASPER – a tool for calculating NMR chemical shifts of oligo- and polysaccharides
http://www.casper.organ.su.se/casper/

Glycan Builder – a software library and set of tools to allow for the rapid drawing of glycan structures with support for all of the most common symbolic notation formats
http://www.unicarbkb.org/builder

GlycoDomainViewer – an online resource to study site glycosylation with respect to protein context and conservation
http://glycodomain.glycomics.ku.dk/

GlyMAP – an online resource mapping out the variational landscape of glyco-active enzymes
http://glymap.glycomics.ku.dk/

GlycoMod – an online tool to predict oligosaccharide structures on proteins from experimentally determined masses
http://web.expasy.org/glycomod/

GlycoMiner/GlycoPattern – software tools designed to detect, characterize and perform relative quantitation of N-glycopeptides based on LC-MS runs
http://www.szki.ttk.mta.hu/ms/glycominer/

Glycosciences.de – a collection of databases and bioinformatics tools for glycobiology and glycomics
http://glycosciences.de/index.php

MonosaccharideDB – a comprehensive reference source for monosaccharide notation
http://www.monosaccharidedb.org/start.action

NetOGlyc – next generation prediction of O-glycosylation sites on proteins
http://www.cbs.dtu.dk/services/NetOGlyc/

SweetUnityMol – software to display 3-D structures of carbohydrates, polysaccharides and glycoconjugates
http://sourceforge.net/projects/unitymol/files/